EC |
4.2.1.5 |
Accepted name: |
arabinonate dehydratase |
Reaction: |
D-arabinonate = 2-dehydro-3-deoxy-D-arabinonate + H2O |
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For diagram of reaction, click here |
Other name(s): |
D-arabinonate hydro-lyase |
Systematic name: |
D-arabinonate hydro-lyase (2-dehydro-3-deoxy-D-arabinonate-forming) |
Links to other databases: |
BRENDA, EXPASY, KEGG, MetaCyc, CAS registry number: 9024-36-6 |
References: |
1. |
Palleroni, N.J. and Doudoroff, M. Characterization and properties of 2-keto-3-deoxy-D-arabonic acid. J. Biol. Chem. 223 (1956) 499–508. [PMID: 13376619] |
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[EC 4.2.1.5 created 1961] |
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EC |
4.2.1.82 |
Accepted name: |
xylonate dehydratase |
Reaction: |
D-xylonate = 2-dehydro-3-deoxy-D-arabinonate + H2O |
Glossary: |
2-dehydro-3-deoxy-D-arabinonate = 2-dehydro-3-deoxy-D-xylonate = 3-deoxy-L-glycero-pent-2-ulonate |
Other name(s): |
D-xylo-aldonate dehydratase; D-xylonate dehydratase; D-xylonate hydro-lyase |
Systematic name: |
D-xylonate hydro-lyase (2-dehydro-3-deoxy-D-arabinonate-forming) |
Links to other databases: |
BRENDA, EXPASY, KEGG, MetaCyc, PDB, CAS registry number: 84788-77-2 |
References: |
1. |
Dahms, A.S. and Donald, A. D-xylo-Aldonate dehydratase. Methods Enzymol. 90 (1982) 302–305. [PMID: 7154961] |
2. |
Donald, A., Sibley, D., Lyons, D.E. and Dahms, A.S. D-Galactonate dehydrase. Purification and properties. J. Biol. Chem. 254 (1979) 2132–2137. [PMID: 422572] |
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[EC 4.2.1.82 created 1986] |
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EC |
4.2.1.141 |
Accepted name: |
2-dehydro-3-deoxy-D-arabinonate dehydratase |
Reaction: |
2-dehydro-3-deoxy-D-arabinonate = 2,5-dioxopentanoate + H2O |
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For diagram of D-arabinose catabolism, click here |
Glossary: |
2-dehydro-3-deoxy-D-arabinonate = 2-dehydro-3-deoxy-D-xylonate = 3-deoxy-L-glycero-pent-2-ulonate |
Systematic name: |
2-dehydro-3-deoxy-D-arabinonate hydro-lyase (2,5-dioxopentanoate-forming) |
Comments: |
The enzyme participates in pentose oxidation pathways that convert pentose sugars to the tricarboxylic acid cycle intermediate 2-oxoglutarate. |
Links to other databases: |
BRENDA, EXPASY, KEGG, MetaCyc, PDB |
References: |
1. |
Brouns, S.J., Walther, J., Snijders, A.P., van de Werken, H.J., Willemen, H.L., Worm, P., de Vos, M.G., Andersson, A., Lundgren, M., Mazon, H.F., van den Heuvel, R.H., Nilsson, P., Salmon, L., de Vos, W.M., Wright, P.C., Bernander, R. and van der Oost, J. Identification of the missing links in prokaryotic pentose oxidation pathways: evidence for enzyme recruitment. J. Biol. Chem. 281 (2006) 27378–27388. [DOI] [PMID: 16849334] |
2. |
Brouns, S.J., Barends, T.R., Worm, P., Akerboom, J., Turnbull, A.P., Salmon, L. and van der Oost, J. Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily. J. Mol. Biol. 379 (2008) 357–371. [DOI] [PMID: 18448118] |
3. |
Johnsen, U., Dambeck, M., Zaiss, H., Fuhrer, T., Soppa, J., Sauer, U. and Schonheit, P. D-Xylose degradation pathway in the halophilic archaeon Haloferax volcanii. J. Biol. Chem. 284 (2009) 27290–27303. [DOI] [PMID: 19584053] |
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[EC 4.2.1.141 created 2013] |
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